Research on Nitrification and Related Processes, Part a

Volume 486
Herausgegeben:Klotz, Martin G.

• Gebundenes Buch

Produktbeschreibung

State-of-the-art update on methods and protocols dealing with the detection, isolation and characterization of macromolecules and their hosting organisms that facilitate nitrification and related processes in the nitrogen cycle as well as the challenges of doing so in very diverse environments.

Produktdetails

• Methods in Enzymology Volume 486
• Verlag: Academic Press / Elsevier Science & Technology
• Artikelnr. des Verlages: C2009-0-62385-0
• Seitenzahl: 608
• Erscheinungstermin: 24. Januar 2011
• Englisch
• Abmessung: 237mm x 167mm x 40mm
• Gewicht: 1080g
• ISBN-13: 9780123812940
• ISBN-10: 0123812941
• Artikelnr.: 32544286

Inhaltsangabe

Part I. Modeling

1. Modelling the role of nitrification in open 1 ocean productivity and the nitrogen cycle


Andrew Yool


2. Continuous cultivation and thermodynamic aspects of niche definition in the Nitrogen cycle


Stefanie Müller and Marc Strous

Part II. Cultivation and cell physiology


3. Isolation, cultivation, and characterization of ammonia-oxidizing bacteria and archaea adapted to low ammonium concentrations


Annette Bollmann, Elizabeth French and Hendrikus J. Laanbroek


4. Cultivation, Detection and Ecophysiology of Anaerobic Ammonium-Oxidizing Bacteria


Boran Kartal, Wim Geerts and Mike S. M. Jetten


5. Cultivation, growth physiology and chemotaxonomy of nitrite-oxidizing bacteria


Eva Spieck and André Lipski


6. Surveying N2O-Producing Pathways in Bacteria


Lisa Y. Stein

Part III. Molecular Microbial Ecology And Processes Measurements


7. Stable isotope probing with 18O-water to investigate growth and mortality of ammonia oxidizing bacteria and archaea in soil


Karen Adair and Egbert Schwartz


8. Measuring Nitrification, Denitrification, and Related Biomarkers in Terrestrial Geothermal Ecosystems


Jeremy A. Dodsworth, Bruce Hungate, José R. de la Torre, Hongchen Jiang, and Brian P. Hedlund


9. Determining the distribution of marine and coastal ammonia-oxidizing archaea and bacteria using a quantitative approach


Annika C. Mosier and Christopher A. Francis




10. 15N-labeling experiments to dissect the contributions of heterotrophic denitrification and anammox to nitrogen removal in the OMZ waters of the ocean


Moritz Holtappels, Gaute Lavik, Marlene M. Jensen and Marcel M.M. Kuypers


11. Assessment of nitrogen and oxygen isotopic fractionation during nitrification and its expression in the marine environment


Karen L. Casciotti, Carolyn Buchwald, Alyson E. Santoro, and Caitlin Frame


12. Identification of Diazotrophic Microorganisms in Marine Sediment Via Fluorescence in situ Hybridization Coupled to Nanoscale Secondary Ion Mass Spectrometry (FISH-NanoSIMS)


Anne E. Dekas and Victoria J. Orphan


13. Measurement and Distribution of Nitrification Rates in the Oceans


B. B. Ward


14. Construction of STOX Oxygen Sensors and Their Application for Determination of O₂ Concentrations in Oxygen Minimum Zones


Niels Peter Revsbech, Bo Thamdrup, Tage Dalsgaard and Donald Eugene Canfield


15. Regulation and measurement of nitrification in terrestrial systems


Jeanette M. Norton and John M. Stark


16. Protocol for the measurement of nitrous oxide fluxes from biological wastewater treatment plants


Kartik Chandran

Part IV. Genetics, Biochemistry and Biogeochemistry


17. Genetic Transformation of Ammonia-Oxidizing Bacteria


Luis A. Sayavedra-Soto and Lisa Y. Stein


18. Dissecting Iron Uptake and Homeostasis in Nitrosomonas europaea


Luis A. Sayavedra-Soto, Neeraja Vajrala, and Daniel J. Arp


19. Production of recombinant multiheme cytochromes c in Wolinella succinogenes


Melanie Kern and Jörg Simon


20. Techniques for Investigating Hydroxylamine Disproportionation by Hydroxylamine Oxidoreductases


A. Andrew Pacheco, Jennifer McGarry, Joshua Kostera and Angel Corona


21. Liquid chromatography - mass spectrometry based proteomics of Nitrosomonas


Hans J.C.T. Wessels, Jolein Gloerich, Erwin van der Biezen, Mike S. M. Jetten and Boran Kartal


22. The Geochemical Record of the Ancient Nitrogen Cycle, Nitrogen Isotopes and Metal Co-factors

L.V. Godfrey1 and J.B. Glass