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This Special Issue aims to provide knowledge about the influence of ruminal microbiota on the fermentation process, enteric methane emissions, and animal performance from ruminants. This will help us to understand how the use of feed additives and/or plant secondary metabolites in ruminant diets may be an interesting feeding strategy to modify the rumen function of animals by altering nutrient digestion pathways, changing the ruminal fermentation process, inhibiting methanogenesis, modulating microbial populations, adjusting the biohydrogenation of fatty acids, and reducing the risk of metabolic diseases, thus improving ruminant productivity and health.