The second part illustrates important examples of tree models with hidden variables. The book discusses the underlying models and related combinatorial concepts of phylogenetic trees as well as the local and global geometry of latent tree models. It also extends previous results to Gaussian latent tree models.
This book shows you how both combinatorics and algebraic geometry enable a better understanding of latent tree models. It contains many results on the geometry of the models, including a detailed analysis of identifiability and the defining polynomial constraints
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